Insertion junction: CLIP2.016024_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.016024
Chromosome:chromosome 10
Location:1280471
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g426850 (1 of 3) PF02458 - Transferase family (Transferase) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAGCAGCGGCAGCAGCAGCAGGGGAAGGGGCTAAAGGGCCGGCCGCAG
Internal bar code:TGCAATAAGCGGCTCGATCTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1607
LEAP-Seq percent confirming:70.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:AAAGCCTCGCTACTCTGGTG
Suggested primer 2:GGACAGCCGGTCTTTTCAGA