Insertion junction: CLIP2.016032_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.016032
Chromosome:chromosome 12
Location:5875215
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTATCCTCCCACGCGGAGTCAGGCGAGTATGGACATAACAGGAGCAGGGG
Internal bar code:TTTGTTATAATCTCCAAATATT

Confirmation - LEAP-Seq

LEAP-Seq distance:2774
LEAP-Seq percent confirming:54.5455
LEAP-Seq n confirming:60
LEAP-Seq n nonconfirming:50
LEAP-Seq n unique pos:110

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTCTTCGCTGAGCAGGAG
Suggested primer 2:CAAGTGAGTGTTTCAGCGGC