Insertion junction: CLIP2.016045_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.016045
Chromosome:chromosome 17
Location:2495457
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g715600 (1 of 1) PF11822 - Domain of unknown function (DUF3342) (DUF3342) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCTTCACCCCCGCATTCCACACCCTACCCAGGTGCTTGTGCCCAGGCCT
Internal bar code:CGTTGAGAGGAAACGAAGGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:717
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTCAACATGGTACCCGAG
Suggested primer 2:GACCACCTCCGCATAAACCA