Insertion junction: CLIP2.016053_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.016053
Chromosome:chromosome 3
Location:8154364
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g200650 CHI2 (1 of 1) K17525 - chitinase domain-containing protein 1 (CHID1); Chitinase-like hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCGCAACTACCTCATCTCGCGGACAAAGCCGGCTCAGCCCAAAAAGCC
Internal bar code:CGAATACTATGGGGTTAACCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1289
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:ACACAGAAGCTGTACCTGGC
Suggested primer 2:AAGTAACCCGCACGTGCTAA