Insertion junction: CLIP2.016054_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.016054
Chromosome:chromosome 13
Location:1243227
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g570400 (1 of 3) 3.1.1.14 - Chlorophyllase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTTGAGCCCCTGGGCGCGGCGGGCAGCGTCAGCGGCAGTAGCGCCGGC
Internal bar code:CTAATCTGGGTAACTCTCTTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2220
LEAP-Seq percent confirming:64.8649
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:CAGTCACTGCTTGGCTCTGA
Suggested primer 2:TGCATGCATGTGTGTTGGTG