Insertion junction: CLIP2.016062_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.016062
Chromosome:chromosome 12
Location:2009168
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g801373 (1 of 2) IPR000104//IPR000477//IPR005135 - Antifreeze protein, type I // Reverse transcriptase domain // Endonuclease/exonuclease/phosphatase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCGTCGTAGCTGACTTCTGGGGTCGTCTCCAGACGTTTGTGACTTTGGG
Internal bar code:AGGGTGTCTAGGTGTCGGGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4209
LEAP-Seq percent confirming:88.2353
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:CGACTTTGCTGCAAACCCTC
Suggested primer 2:ATGTGACTGCTGTGTGGAGG