Insertion junction: CLIP2.016081_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.016081
Chromosome:chromosome 6
Location:3063459
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g275000 paralog of LCI36; (1 of 4) K15382 - solute carrier family 50 (sugar transporter) (SLC50A, SWEET) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCGCGTCATCCCCGCTGTGCCCCCTTTCCTTCCCATCCATTCCCTCAC
Internal bar code:GATACGTGTTGGTGCTATGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:942
LEAP-Seq percent confirming:95.8333
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:GACTGTGTGCATTTGTGCGT
Suggested primer 2:ACTCAAGCAGTCCAGCAGTC