Insertion junction: CLIP2.016083_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.016083
Chromosome:chromosome 11
Location:3238693
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g476200 NZF1 (1 of 19) PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH); CCCH-type zinc finger protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAATCATCAGGTGAGCAGGCCGCGTGCACGCACCTTGTCACCGCCGGCGG
Internal bar code:CGCGGAATTCCGTCGGACATTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2535
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:84
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:96

Suggested primers for confirmation by PCR

Suggested primer 1:CCACGTGCACAGTTGGATTG
Suggested primer 2:ACTTGTCACCGTACTGGCAG