Insertion junction: CLIP2.016085_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.016085
Chromosome:chromosome 6
Location:3545957
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278122 (1 of 1) PTHR10504:SF73 - PROTEIN C05C9.1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTAGGTGGAGGTGCTGGCTGTTCGCGAGACAAGCTTGATTAAGTGGACG
Internal bar code:CAGTTAAGTATTGAATGGGCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2273
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:80
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:80

Suggested primers for confirmation by PCR

Suggested primer 1:GATCCCCATCATGCACGCTA
Suggested primer 2:CTTGTGCAGCTCAAACACCC