Insertion junction: CLIP2.016089_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.016089
Chromosome:chromosome 11
Location:1861777
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467795 (1 of 1) K05853 - Ca2+ transporting ATPase, sarcoplasmic/endoplasmic reticulum (ATP2A) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGGGTCGTATCTTGTTTTTGGGGTATTGTCTAGCTCCAGACAAAAACG
Internal bar code:CCATTAACTGCTGACTCGGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:722
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CGTAGACGTGAGGGTGATCG
Suggested primer 2:AGGATGATTGGAAACGCGGT