Insertion junction: CLIP2.016092_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.016092
Chromosome:chromosome 12
Location:3606847
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g513000 GTR17 putative Glycosyltransferase; (1 of 1) 2.4.1.206 - Lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGCTACATCCCATACTCTGCCTGCCGCCCCGCCTCAGTCCCTGGAGGC
Internal bar code:AATTACAGGAGTTTTGACACAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1907
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTGCTGACTGAGGCATGA
Suggested primer 2:CTATTTCTTGCCACGCCACG