Insertion junction: CLIP2.016096_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.016096
Chromosome:chromosome 3
Location:6598228
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g194700 AGL1 (1 of 1) 3.2.1.20//3.2.1.3 - Alpha-glucosidase / Maltase-glucoamylase // Glucan 1,4-alpha-glucosidase / Lysosomal alpha-glucosidase; Alpha glucosidase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAACAGCGCGGCGCGGCGCGGCGTTGCGTATGTGTGTGGTTGTATGTGTA
Internal bar code:AGGCGGGGGTCCTGACGCTAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1442
LEAP-Seq percent confirming:82.2222
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTCGAATACCCGCTAACC
Suggested primer 2:GTTCCGCACGGTAATTGGTG