Insertion junction: CLIP2.016115_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.016115
Chromosome:chromosome 12
Location:1420256
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g488600 (1 of 1) IPR000104//IPR006059 - Antifreeze protein, type I // Solute-binding family 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCACACGGAGCAACAATACCGCAGCAGCGAGCAGTACGATGGCAGGTGCC
Internal bar code:TACGATATGCCTCGGCCATGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:4414
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:105
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:105

Suggested primers for confirmation by PCR

Suggested primer 1:TCGATACAGCGGGAGAATGC
Suggested primer 2:TCGTGGTAGGTGGTCAATGC