Insertion junction: CLIP2.016128_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.016128
Chromosome:chromosome 16
Location:6185365
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g676850 (1 of 14) IPR003593//IPR003959//IPR027417 - AAA+ ATPase domain // ATPase, AAA-type, core // P-loop containing nucleoside triphosphate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTTCCATTCATGTTTGGTGAGAGAAGGGGGTGGGAGGAGGCATGTTTGC
Internal bar code:CTCCGAGATACGTGGGTCTTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1115
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:GTACAACTACAACCCCGCCA
Suggested primer 2:GAGGGATCTAGGGTGGTGGT