Insertion junction: CLIP2.016131_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.016131
Chromosome:chromosome 12
Location:4513073
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g520950 BOP5,IDA-IC138,IC138,DIC4 Axonemal inner dynein arm I1 intermediate chain; (1 of 1) PTHR12442:SF12 - WD REPEAT-CONTAINING PROTEIN 78 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATGGACCACTGCGTGACGCGGCCGTCTGTGGAGATCGACACCAGCGGCT
Internal bar code:TGTTCCCTTCGTGTGTGGGATC

Confirmation - LEAP-Seq

LEAP-Seq distance:1563
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GAGTGTGGCTGAGAGCAACT
Suggested primer 2:GTATCGTCCAGTCGCCTGAG