Insertion junction: CLIP2.016133_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.016133
Chromosome:chromosome 17
Location:5347705
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g738100 (1 of 587) 2.7.11.1 - Non-specific serine/threonine protein kinase / Threonine-specific protein kinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCTGGTTCCAAACGTGCGGTAACAACAACACAATACGCATGCGCATAG
Internal bar code:TTTTATGCGTTCCTGGATTTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2188
LEAP-Seq percent confirming:86.6667
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGATTGATGGGGTGGGCT
Suggested primer 2:GTACTGCTACTGCTGCTGCT