Insertion junction: CLIP2.016135_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.016135
Chromosome:chromosome 3
Location:3425241
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g166800 (1 of 1) PTHR10877//PTHR10877:SF130 - POLYCYSTIN-RELATED // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGAAGCCGCGCAGGCCACGCCTGCGCCGGTGGCGGCTGCTGCCGCTGCTG
Internal bar code:CGTAACATATGGGTGTAGCAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2576
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTCCAGGTTACTCGCAAG
Suggested primer 2:CTGATGGAACTGGCAGTCCC