Insertion junction: CLIP2.016135_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.016135
Chromosome:chromosome 3
Location:3425242
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g166800 (1 of 1) PTHR10877//PTHR10877:SF130 - POLYCYSTIN-RELATED // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGCCAACCGATTGCGGCTGCGGCTGCCCGTCATGCTCCGGCGCCGCCG
Internal bar code:CATAACAGCTCTGCTTTAGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1450
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:CTGATGGAACTGGCAGTCCC
Suggested primer 2:TGCTCCAGGTTACTCGCAAG