Insertion junction: CLIP2.016144_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.016144
Chromosome:chromosome 6
Location:1673837
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g262300 CYN51 Cyclophilin 51; (1 of 2) K05864 - peptidyl-prolyl isomerase D [EC:5.2.1.8] (PPID, CYPD) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGGGCCGGCGTTGGCCATGGACAGCAGGCCCTGAGGGACGGAGGGAGGG
Internal bar code:ACTTGTGTTAAACGGTATATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1491
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:TTCTACCGCATCATCGACCG
Suggested primer 2:GTAGTACCCCAGCCCAAACC