Insertion junction: CLIP2.016147_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.016147
Chromosome:chromosome 15
Location:436392
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g635700 MAPKKK12 (1 of 40) PTHR23257//PTHR23257:SF513 - SERINE-THREONINE PROTEIN KINASE // SUBFAMILY NOT NAMED; Mitogen-Activated Protein Kinase Kinase Kinase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCTCATCCTGCGCTGCCGTCACCGCGAGCAGGCCGGTTGGATCCGTTGG
Internal bar code:AGCACATGTAGTGACTTGAGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:909
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCTTACCTCTGCAGGCAA
Suggested primer 2:CACGATGTTGGGGTGAGACA