Insertion junction: CLIP2.016149_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.016149
Chromosome:chromosome 9
Location:2684820
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g801022 (1 of 12) IPR011010//IPR013762 - DNA breaking-rejoining enzyme, catalytic core // Integrase-like, catalytic domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCCCGGTGGGGCACGGCGTAAGTGGTCGGGCGTTGTGTTGTTCTTTCA
Internal bar code:TGGTCAGAAAGGACGTGATCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2613
LEAP-Seq percent confirming:23.3333
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:CATGACGTATGCCGCTAGGT
Suggested primer 2:CGGAGCCCATTTTGCTATGC