Insertion junction: CLIP2.016157_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.016157
Chromosome:chromosome 10
Location:1840880
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g430950 RAD54B,SRH18 (1 of 1) K10875 - DNA repair and recombination protein RAD54 and RAD54-like protein (RAD54L, RAD54); SNF2-related DNA/RNA helicase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCCATCCCCACCCATCCACCCTCCCGCCCGGCCTACCTTGAGCCACTT
Internal bar code:TTACTTGTATACCCATGGACAA

Confirmation - LEAP-Seq

LEAP-Seq distance:816
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTAGCTGACGACATGGGA
Suggested primer 2:AGCGACATCACTTTCACGGT