Insertion junction: CLIP2.016165_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.016165
Chromosome:chromosome 8
Location:466728
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g359000 (1 of 32) IPR006502 - Protein of unknown function PDDEXK-like CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCCATGGCGCACTGGCCGGAGCACTGGCTTAGCTCGCAGCGCCGGCGC
Internal bar code:TCTCGGGGACCTTCAGGCTCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1889
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CCCACGTTCTTGCCTACCAT
Suggested primer 2:ATGGCGGAATGGGATGTGTT