Insertion junction: CLIP2.016166_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.016166
Chromosome:chromosome 10
Location:6244472
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g463300 (1 of 1) PTHR31515:SF0 - TRANSMEMBRANE PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCACGCTACCCCCACCAGCCGCGCGACCGACTGTTGCAGGCTCGCTTG
Internal bar code:CCCCATTAACTATTACTCAGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1810
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:TTCGATGATGGTGGTGCGAA
Suggested primer 2:AATAGGGTTGGTCGGCACTG