Insertion junction: CLIP2.016178_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.016178
Chromosome:chromosome 12
Location:5247447
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g527700 CYG19 (1 of 2) IPR001054//IPR029016//IPR029787 - Adenylyl cyclase class-3/4/guanylyl cyclase // GAF domain-like // Nucleotide cyclase; Adenylate/guanylate cyclase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGAGCAGCAGGAGCAGCAGGAGCAGCAGCAGCAGCAGCACAGCGCAGG
Internal bar code:TGCCAAACCCGGGCCGCTTGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2874
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:ATTGGAGAAGCGTGCAGTCA
Suggested primer 2:TGTGTACCTTTGGTTGGCGT