Insertion junction: CLIP2.016181_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.016181
Chromosome:chromosome 8
Location:3663880
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g380000 UMM7 UbiE/COQ5 methyltransferase family protein; (1 of 1) PTHR10108//PTHR10108:SF894//PTHR23150//PTHR23150:SF24 - METHYLTRANSFERASE // SUBFAMILY NOT NAMED // SULFATASE MODIFYING FACTOR 1, 2 // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTGTAATACGTGGGGCAGGCGCCAACGCGCTGGCTTTGATAGGCTGTT
Internal bar code:CTCTTACGCGCATGACACATTC

Confirmation - LEAP-Seq

LEAP-Seq distance:427
LEAP-Seq percent confirming:37.5
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CGCAAACACTCACCAGGTTG
Suggested primer 2:ATTGCCTGGCCTCTTTCCTC