Insertion junction: CLIP2.016181_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.016181
Chromosome:chromosome 8
Location:3663881
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g380000 UMM7 UbiE/COQ5 methyltransferase family protein; (1 of 1) PTHR10108//PTHR10108:SF894//PTHR23150//PTHR23150:SF24 - METHYLTRANSFERASE // SUBFAMILY NOT NAMED // SULFATASE MODIFYING FACTOR 1, 2 // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCAATCCCCTCCGTTCCACCCAGCTCAGCCACACCATCCGCTTTCCTTC
Internal bar code:CTCTTACGCGCATGACACATTC

Confirmation - LEAP-Seq

LEAP-Seq distance:4269
LEAP-Seq percent confirming:98.5916
LEAP-Seq n confirming:70
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:71

Suggested primers for confirmation by PCR

Suggested primer 1:ATTGCCTGGCCTCTTTCCTC
Suggested primer 2:CGCAAACACTCACCAGGTTG