Insertion junction: CLIP2.016184_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.016184
Chromosome:chromosome 7
Location:4436785
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g343300 (1 of 41) PTHR32523//PTHR32523:SF8 - FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTACCTGGCCTTGAGACAGCAGCCACAGGTACCGCGGCCGAACGGTGCT
Internal bar code:AAGCCTACGCATTATACTCCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1216
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTGCTGATGGATGTGCTC
Suggested primer 2:CATCGCTCGCAATCCAAGTG