Insertion junction: CLIP2.016195_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.016195
Chromosome:chromosome 11
Location:839685
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467642 (1 of 2) PTHR27000:SF119 - LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE BAM2-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCTTCCTGGGTGCCTGACCCACCGGTTGTGTGTGGCCATTCGTCTCCC
Internal bar code:TCCGTTGTACCGTCCGGCGATC

Confirmation - LEAP-Seq

LEAP-Seq distance:2431
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TGAAGCATAAGGGGCAAGGG
Suggested primer 2:GCGTGTGGTCACAAACTTCC