Insertion junction: CLIP2.016195_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.016195
Chromosome:chromosome 11
Location:839692
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467642 (1 of 2) PTHR27000:SF119 - LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE BAM2-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACGACACGCTATCCCACCACGAACCCCAATCCAGCCCGCCCACCATCCA
Internal bar code:TTCTGCGTGGTCGCGAGGAAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2754
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTGTGGTCACAAACTTCC
Suggested primer 2:TGAAGCATAAGGGGCAAGGG