Insertion junction: CLIP2.016196_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.016196
Chromosome:chromosome 3
Location:4311591
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g174300 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGATATTGGGGGCTATCAACGCGCCCCTGAAGCTTGCATACAAGACGGG
Internal bar code:TGGCAAGCGAGTCCATATATTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2708
LEAP-Seq percent confirming:92.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:CACTTGCGGTCACTTTCGTG
Suggested primer 2:CCAGCCCAAACAAACCGAAG