Insertion junction: CLIP2.016203_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.016203
Chromosome:chromosome 8
Location:3471085
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g378700 (1 of 2) K13173 - arginine and glutamate-rich protein 1 (ARGLU1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCCTACTGGGCATGGTCAAACGACTGCCTCCCCAAGCCAGAAGCCAGA
Internal bar code:CCTCGATGGGATTGGACACAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:596
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCCATCCCATCCACACTG
Suggested primer 2:TCGAGTCGGTGAGTCTCCAT