Insertion junction: CLIP2.016203_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.016203
Chromosome:chromosome 8
Location:3471094
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g378700 (1 of 2) K13173 - arginine and glutamate-rich protein 1 (ARGLU1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTAGGAACCAAGGGTGGGATCGGTGGTGGGAGTGGTTTCGTCTCGTTGG
Internal bar code:CCTCGATGGGATTGGACACAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1753
LEAP-Seq percent confirming:97.1429
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:TCGAGTCGGTGAGTCTCCAT
Suggested primer 2:AAGCCATCCCATCCACACTG