Insertion junction: CLIP2.016203_4

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.016203
Chromosome:chromosome 9
Location:2254592
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g394900 CYA10 (1 of 1) IPR000209//IPR001054//IPR029787 - Peptidase S8/S53 domain // Adenylyl cyclase class-3/4/guanylyl cyclase // Nucleotide cyclase; Solute-binding protein-like adenylate cyclase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGGCTTGAGTCTGGGGCCTTACCAATGCTGTCAATTGCGGTAATGCCTG
Internal bar code:CACTCTATCCGGGGGGACTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1509
LEAP-Seq percent confirming:35.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GCGGCATATTGCGGTACATG
Suggested primer 2:AAGGCTCCGTATTAGGCACG