Insertion junction: CLIP2.016210_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.016210
Chromosome:chromosome 12
Location:6315575
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g536850 (1 of 3) IPR000182//IPR011011//IPR016181 - GNAT domain // Zinc finger, FYVE/PHD-type // Acyl-CoA N-acyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGAATGTGTGCGTATGTGTGTTTAAGGGCACAAGGAGGACATTGCACAA
Internal bar code:AAGTGTCTTGGACTAGAGTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2389
LEAP-Seq percent confirming:96.6667
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCTCTCCCCTCCTTGTCA
Suggested primer 2:CCGTAGCCACCAGATCCATC