Insertion junction: CLIP2.016212_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.016212
Chromosome:chromosome 7
Location:3839445
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g338750 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTATCTAAGCATTTGATATGAAGGGGTTTGGCAGGGCTCGTGGGCCCGA
Internal bar code:TTTAGAAGAAGAGGTACGAGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2572
LEAP-Seq percent confirming:2.27273
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:86
LEAP-Seq n unique pos:88

Suggested primers for confirmation by PCR

Suggested primer 1:TACAGGTGAGTGCCGGAAAC
Suggested primer 2:CTCTTGCTCCCACTGCTGG