Insertion junction: CLIP2.016213_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.016213
Chromosome:chromosome 3
Location:4038212
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g171850 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCGCCGCGGGGCCGTCACACCGTGGGCGGGTTGCCTGCAGCTGCTGCAG
Internal bar code:GCCCGCGACAATGGTTTTGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2342
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTACCACTTGCTCCATGC
Suggested primer 2:AGTACACACAGGACATGGCG