Insertion junction: CLIP2.016220_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.016220
Chromosome:chromosome 1
Location:6345187
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g044900 (1 of 5) PTHR10351:SF42 - LD40663P intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAAAACAAACGCGCAGGCAAATAAATTGGTCGTATCAGCTGATTTGTCG
Internal bar code:GGCCTAGCAGTGAGGCGCAAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1174
LEAP-Seq percent confirming:85.2941
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCTTGCACGTGTCCATTG
Suggested primer 2:GGTCAGTGCGTGAAGTGAGA