Insertion junction: CLIP2.016223_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.016223
Chromosome:chromosome 11
Location:2452294
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g095116 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCACGGGCGCGGCAGCTGCCACTGCCTCGGCCGGTGCTGCTGCGGCGGCT
Internal bar code:GACCTTGAGTATGATTATGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3231
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:CGGGAAACATGGGTGTCTCA
Suggested primer 2:GCGCCGTGTGTAGTAAGCTA