Insertion junction: CLIP2.016229_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.016229
Chromosome:chromosome 15
Location:1229415
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g801722 NCL62 Nuclear Control of chloroplast-Like 62; (1 of 39) PF08373 - RAP domain (RAP) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCTGGCAGGCGCAACATGAGCTGGGCGGCGAGGTGGCGGAGGCTCTTGC
Internal bar code:GTGTGGGGGCGATCTACGATTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2840
LEAP-Seq percent confirming:6.25
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:60
LEAP-Seq n unique pos:64

Suggested primers for confirmation by PCR

Suggested primer 1:CTCTGCTTGTTGCTGCAAGG
Suggested primer 2:GCTTTGCCGGCTTTAAACCA