Insertion junction: CLIP2.016250_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.016250
Chromosome:chromosome 4
Location:3773441
Confidence (%):63
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00096397

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATGATTTGGAGGTCTGGCCCTGTCTCTTAATGTCAGCCCATGCAGCGGC
Internal bar code:CGAGAAAAACATGTCACGTACC

Confirmation - LEAP-Seq

LEAP-Seq distance:757
LEAP-Seq percent confirming:4.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:24
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGGCAATCCATACGCAGC
Suggested primer 2:ACACATAGCGCCGGATGTAG