Insertion junction: CLIP2.016251_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.016251
Chromosome:chromosome 2
Location:2517377
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g092150 CSL (1 of 1) PTHR23155//PTHR23155:SF444 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN // SUBFAMILY NOT NAMED; Chlamydomonas SHOC2/SUR8-like LRR intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTGGAACCGAACGTTGTGTACGTGTGTGTGTGTGTGTGTGTGTGTGTGT
Internal bar code:CATGTATACGGAGAAACTGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:184
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:ATCTCACCCTGCACACCATG
Suggested primer 2:CCTTCTTCCCATCACGGCTT