Insertion junction: CLIP2.016252_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.016252
Chromosome:chromosome 3
Location:3144804
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g164800 (1 of 1) PTHR24361:SF363 - PROTEIN KINASE-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCGCAACAAGGTGCTCGAGACCCTGCACGACGCCTCGCAGCAGTCTGCC
Internal bar code:AGGTTGAGGGCTCAGTGACAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1097
LEAP-Seq percent confirming:9.09091
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:TTCTCTGCCCGCATGCTTTA
Suggested primer 2:TGGAGGAGACCGTCGTTTTG