Insertion junction: CLIP2.016262_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.016262
Chromosome:chromosome 6
Location:8378027
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g307800 CYN49 (1 of 1) IPR003609//IPR029000 - PAN/Apple domain // Cyclophilin-like domain; Cyclophilin 49 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTTGTGCTCTTTAACACACGCAACCCGCACCGGGCGTGTGTTTTAAAA
Internal bar code:GTCGTTGGTCCCCCCACGGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:664
LEAP-Seq percent confirming:1.78571
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:110
LEAP-Seq n unique pos:112

Suggested primers for confirmation by PCR

Suggested primer 1:AGGAAGCGGAAACTTGAGGG
Suggested primer 2:GCCCTGTATGCCAAAGTCCT