Insertion junction: CLIP2.016264_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.016264
Chromosome:chromosome 4
Location:243409
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g217400 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGCTGTGGCGGCCGGCGCCGCCGCCGGTGGCCTGCGGCAGGCCGCCGCC
Internal bar code:TCTGGGTTTTTGACGCGAGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:208
LEAP-Seq percent confirming:11.1111
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCAGACATCGGGTGTGAT
Suggested primer 2:AGACACCAAGCGGCTTAGTG