Insertion junction: CLIP2.016265_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.016265
Chromosome:chromosome 17
Location:2565231
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g716101 POLL1 (1 of 1) PF10391 - Fingers domain of DNA polymerase lambda (DNA_pol_lambd_f); DNA polymerase lambda CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCAGAATCTGGGTGTGGCTGTGACTGTTGCGACATGTGTAGCGATGGC
Internal bar code:GGAGAATCCATATAGGGCGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1276
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CCACAGGGTTCAGGCTACAG
Suggested primer 2:GTCCCGTCTCCTTTCACTGG