Insertion junction: CLIP2.016267_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.016267
Chromosome:chromosome 3
Location:149618
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g143987 (1 of 1) IPR011016//IPR014048 - Zinc finger, RING-CH-type // Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCCGTTGCACTCGCTGTTCGCGTGAGGCCGCACATGTATGTGGACACA
Internal bar code:AAGTCCCTCGACGCAGTACAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:4229
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:ATTGGTGGTGGGCATACAGG
Suggested primer 2:CGAAGTTCCGGCAACAAGTG