Insertion junction: CLIP2.016275_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.016275
Chromosome:chromosome 9
Location:166241
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g386734 (1 of 2) PTHR31646//PTHR31646:SF1 - FAMILY NOT NAMED // ALPHA-1,2-MANNOSYLTRANSFERASE MNN2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGGTGTCTAGAGTGGTGTCTAGAGTGGTGCATTGGTGTCTAGAGTGAT
Internal bar code:TAGTGCTAGTCCTGACGATGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3087
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:69
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:69

Suggested primers for confirmation by PCR

Suggested primer 1:GACTTCACCAATGATCGCGC
Suggested primer 2:GGGTTGTTACTGGCGGTGTA