Insertion junction: CLIP2.016286_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.016286
Chromosome:chromosome 17
Location:4334564
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g730250 PIT,PIT1 (1 of 1) PTHR12175//PTHR12175:SF2 - AD039 HT014 THIOREDOXIN FAMILY TRP26 // SUBFAMILY NOT NAMED; Proteasome-interacting thioredoxin CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAACCAGGGCGGCGAGGATGTGACGCGGCTGTGCAAGATCGCGCTGATG
Internal bar code:TATATGGGGTGGTCGTTTGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:4628
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TTCCAGTGGCAGACTTCGAC
Suggested primer 2:GGAGTATGGGTGCGGGTATG