Insertion junction: CLIP2.016290_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.016290
Chromosome:chromosome 9
Location:5379909
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre09.g408100 (1 of 68) 2.1.1.43 - Histone-lysine N-methyltransferase / Protein-lysine N-methyltransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAGCCCCCGCACGAAAGCGGTACACATGTAACAGGTGGCTGGTCAGGCG
Internal bar code:GATTTTCAAAGTTTGTTTGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:112
LEAP-Seq percent confirming:4.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:24
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:ATGACTATGAGCGCTTCCGG
Suggested primer 2:ACGGGGGCTTTAAGTGATGG